Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVS---------TSGRILVFLSVSRIALQSLMMLEIT----ISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYF--VKIANFSYPLFLKLRWRITGLIPWLLWLSVFISFSHSMFCINICTVYCNNSFPIHSSNSTKKTYLSEINVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATGSNDPSMEAHMGAIKAISYFLILYIFNAVALFIYLSNMFDINSLWNNLCQIIMAAYPASHSILLIQDNPGLRRAWKRLQLRLHLY----PKEWTL---- |
| 1DMU Chain:A ((1-299)) | -----MYNLHREKIFMSYNQNKQYLEDNPEIQEKIELYGLNLLNEVISDNEEEIRADYNEANFLHPFWMNYPPLDRGKMPKGDQIPWIEVGEKAVGSKLTRLVSQREDITVREIGLPTGPDERYLLT-SPTIYSLTNGFTDSIMMFVDIKSVGPRDSDYDLVLS-PNQVSGNGDWA----------------QLEGGIQNNQQTIQGPRS-SQIFLPTIPPLYI---LSDGTIAPVVHLFIKPIYAMRSLTK-------GDTG-------------QSLYKIKLASVPNGLGLFCNPGYAFD--SAYKFLFRPG-------------KDDRTKSLLQKRVRVDLRVLDKIGPRVMTIDMDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -303277 for 2177 contacts (-139.3/contact) +
2D Compatibility (PS) -28895 + (NN) -2231 + (LL) 5228
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -340225.0 ( -156.28 by residue)
QMean score : 0.202
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