Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATVNTDATDKDISKFKVTFTLVVSGIECITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLF------RIVYNQNSVYILFKVITVFLNHSNLW---------FAAWLK--VFYCLRIANFNHPLFFLMKRKIIVLMPWLLRLSVLVSLSFSFPLSRDVFNVYVNSSIPIPSSNSTEKKYFSETNMVNLVFFYNMGIFVPLIMFILAATLLILSLKRHTLHMGSNATGS--------------RDPSMKAHIGAIKATSYF---------------LILYIFNAIALFLSTSNIFD---TYSSWNILCKIIMAA----YPAGHSVQLILGNPGLRRAWKRFQHQVPLYLKGQTL---- |
| 1W5C Chain:D ((1-350)) | MTIAIGRAP-------------------------AERGWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQ-----SSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164698 for 1940 contacts (-84.9/contact) +
2D Compatibility (PS) -29936 + (NN) -4973 + (LL) 2064
1D Compatibility (HY) -16000 + (ID) 2050
Total energy: -215593.0 ( -111.13 by residue)
QMean score : 0.071
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