Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHTLYPTPFALYPINISAAWHLGPLPVSCFVSNKYQCSLAFGATTGLRVLVVVVPQTQLSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVILSKRIPETMATFGLKHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSVFQVITINPRNSRWAEMK-VKAPTYIGLSNI-LCWAFHMLVNAIFPIYTTGKWSNNNITKKGDLGYCSAPLSDEVTKSVYAALTSFHDVLCL---GLMLWASSSIVLVLYRHKQQVQHICRNNLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDNSSWWLVNTAALI--IACFPTISPFVLMCRDP--SRSRLCSICCRRNRRFFHDFRKM |
| 2ZDS Chain:A ((1-321)) | ------PRNFTLFTGQWA--------------DLPLEEVCRLARDFGYDGLELACWGDHF-----------------------EVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQ-AVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGV------------------DTVIGFTGSAIWHLVAMFPPA-----PESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSE--IAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGS------------HLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212763 for 2586 contacts (-82.3/contact) +
2D Compatibility (PS) -30395 + (NN) 3712 + (LL) 6320
1D Compatibility (HY) 8800 + (ID) 1200
Total energy: -225526.0 ( -87.21 by residue)
QMean score : 0.099
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