Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSCVKLWPSGAPAPLVSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVNSKAIS-----REVKAMASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLL---QSQCPRPWPLLCRLLKEVVLGMFYLHDQNPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILMWAVLAGREVELP-TEPSLVYEAVCNRQNRPSLAELPQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMNAAVSTVKDFLSQLRSSNRRFSIPESGQGGTEMDGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSMAQPPQTPETSTFRNQMPSPTSTGTPSPGPRGNQGAERQGMNWSCRTPEPNPVTGRPLVNIYNCSGVQVGDNNYLTMQQTTALPTWGLAPSGKGRGLQHPPPVGSQEGPKDPEAWSRPQGWYNHSGK |
| 4UEU Chain:A ((12-268)) | -------------------EITLERKLGSGQFGEVYEGKWRNYNIEVAVKTLKEGTMSVEEFLQEAQIMKKLKHPNLVQLYGVCTK-----EPPIYIITEYMSHGSLLDYLRDCEGHTVNAQALL-DMAAQVASGMAYLESQN--FIHRDLAARNCLVGENNVVKVADFGLARLI-----------AKFPIKWTAPEA-ISYNR-FSIKSDVWAFGILLWEIFTYGQVPYPGMSGSEVIEQVERGYRMPR----PQGCPEE-----IYELMLQCWNKSPEERPTFAETLHALETMF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116632 for 1847 contacts (-63.1/contact) +
2D Compatibility (PS) -25448 + (NN) -10811 + (LL) 8276
1D Compatibility (HY) -21200 + (ID) 4250
Total energy: -170065.0 ( -92.08 by residue)
QMean score : 0.396
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