Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCGHVDSLVRPCLSYVQGG---PG-------------------PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH--N-L-------NEDNARSIPPKCGVNLPYTISLNIDCSRV
1PSY Chain:A ((25-119))
-------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCM------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22596 for 481 contacts (-47.0/contact) +
2D Compatibility (PS) -6279 + (NN) -220 + (LL) 1428
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -33317.0 ( -69.27 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: