Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSALSPCISYARGN----GAN-----PPAACCSGVRSLAGAARSTADKQAACKC--IKSAAGGL------------------------NAGKAAGIPSKCGVSVPYAISSSVDCSKIR
1B1U Chain:A ((15-109))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAY--CRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19875 for 376 contacts (-52.9/contact) +
2D Compatibility (PS) -5835 + (NN) 1311 + (LL) 2160
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -26389.0 ( -70.18 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: