Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QCD--PEQLSACVSPIFYGTA-PSESCCSNLRAQQKE-----------GCLCQYAKD-PTYASYVNNTNARKTIAACGIPIP-------SC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG----LNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19159 for 394 contacts (-48.6/contact) +
2D Compatibility (PS) -6722 + (NN) -2310 + (LL) 300
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -32091.0 ( -81.45 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: