Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKNPVL--------LPRLLIACRVPHPKC-
1L6H Chain:A ((1-69))
AGCNAG------QLTVCTGAIAGGARPTAACCSSLRAQQGCFCQF-AKDPRYGRYVNSPNARKAVSSCGIALPTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29857 for 391 contacts (-76.4/contact) +
2D Compatibility (PS) -5551 + (NN) -1622 + (LL) 576
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -38354.0 ( -98.09 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: