Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVIG----D-NPPSP-----------IKECCELLQAA--NLKCICRFKS-----VLPVL-A--V--Y-PSKVQALLSKCGLTTIPPA-CQALRN
1W2Q Chain:A ((23-118))
-----VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRCD----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36992 for 355 contacts (-104.2/contact) +
2D Compatibility (PS) -6929 + (NN) -5029 + (LL) 840
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -52710.0 ( -148.48 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: