Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSSPDNEAMKLAPCAGAAQDAN----S--AVPGGCCTQIKRFSQNPKCLCAILLSDTAK---AS--------GVDPEVALTIPKRCNFANRPVGYKCGAYTLP
1HSS Chain:A ((16-106))
--------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31236 for 416 contacts (-75.1/contact) +
2D Compatibility (PS) -6622 + (NN) -1094 + (LL) 448
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -43254.0 ( -103.98 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: