Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAGTECQNDVEVLKTTCYKFVEK----DGPKLQ---PSPDCCTSMKGVNVPCVCTYLGSPGVRDNI-------------N-------M--DKVFYV--TKQCGIAIPGNCGGSKV
1BEA Chain:A ((18-110))
--------------PSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTAL-SILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS-------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34828 for 360 contacts (-96.7/contact) +
2D Compatibility (PS) -5922 + (NN) 1424 + (LL) 708
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -42968.0 ( -119.36 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: