Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ERCNDSGIE--VLRGCPDSIDKE---LPTPP---R------PSQGCCTLVRIIGMECVCEVINKEIEAAI--------DMQ----KLVNVAAACGRPLAPGSQCGSYLVPGGMIRH
1SM7 Chain:A ((4-102))
-KCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIG----------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47691 for 496 contacts (-96.2/contact) +
2D Compatibility (PS) -6621 + (NN) 7531 + (LL) 412
1D Compatibility (HY) 400 + (ID) 650
Total energy: -46619.0 ( -93.99 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: