Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDTGAAAGVPSCASKLVPCGGYLN----ATAA-PP----PASCCGPLREAAANETACLCAILTNK--AA------------LQAF-----GVAPEQGLLL--AKRCGVTTD--ASACAKSASSSATAAAAAAV
1BEA Chain:A ((15-120))
--------------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG-----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30170 for 468 contacts (-64.5/contact) +
2D Compatibility (PS) -6914 + (NN) 4190 + (LL) 2028
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -36516.0 ( -78.03 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: