Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVNPCVAYGLGR-APIAPCCRALNDLRFVDSRNLRRAACRCL--VGV-VNRNPGLRRNNRFQNVPGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGARPTAACCSSLRA----------QQGCFCQFAKDPRYGR--YVNSP-NARKAVSSCGIAL--P-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24262 for 361 contacts (-67.2/contact) +
2D Compatibility (PS) -5897 + (NN) -3078 + (LL) 3368
1D Compatibility (HY) -400 + (ID) 600
Total energy: -30869.0 ( -85.51 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: