Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DAISCGQVTSGLVPCFGYLAAG----G---P---------------VPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANT---RI-------NLNNANSLPGKCGISIGYKITPNIDCSKIH
1PSY Chain:A ((25-118))
---------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRC--------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42480 for 452 contacts (-94.0/contact) +
2D Compatibility (PS) -6032 + (NN) -389 + (LL) 1136
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -52465.0 ( -116.07 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: