Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCQQVTVAVTPCIGYARTGGTMPPDCCNGVRNLNSAAKNTPDRQQACICLKQMS-SIPGINMSIVSEIPAKCNVNIGYPIAMSTDCSKVK
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67778 for 614 contacts (-110.4/contact) +
2D Compatibility (PS) -9063 + (NN) -633 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -87116.0 ( -141.88 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: