Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVTSNLAPCLAYLRN----TGP----------LGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-G----INLGKAAGLPSTCGVNIPYKISPSTDCSKVQ
1S6D Chain:A ((19-97))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36487 for 378 contacts (-96.5/contact) +
2D Compatibility (PS) -6166 + (NN) -1417 + (LL) 1380
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -46940.0 ( -124.18 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: