Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCAQVNLLLGTCMPYLIGFDSSPSLACCAGVRNLKRLAPTTADRRVACDCVKAAAARHPNIRDDAASTLPNKCGVDFNIPVSNTTKCQE
1SIY Chain:A ((1-89))
MTCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNS
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69232 for 678 contacts (-102.1/contact) +
2D Compatibility (PS) -9494 + (NN) -7849 + (LL) -76
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -94751.0 ( -139.75 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: