Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYS--SSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49340 for 601 contacts (-82.1/contact) +
2D Compatibility (PS) -8892 + (NN) -2498 + (LL) 120
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -70010.0 ( -116.49 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: