Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------VTCSPLQLSPCAGAITGSGPP-----SATCCSRLREQTPCLCGYYRD-PNLRQY-VNSPNAQKVARTCGVSVRC---------------------------------
1XFL Chain:A ((1-114))
MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAI--QAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA
General information:
TITO was launched using:
RESULT:
Template:
1XFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9334 for 342 contacts (-27.3/contact) +
2D Compatibility (PS) -6670 + (NN) 1883 + (LL) 164
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -16457.0 ( -48.12 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_1XFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XFL-query.scw
PDB file :
Tito_Scwrl_1XFL.pdb
: