Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYGRSPSADCCQRVRVS--HVECVCPYVTPKTASIIGV--------IGVDNVVKKIEGCGRTVPRKFKCGSITTP
3OB4 Chain:A ((429-487))
----------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQR---------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9575 for 261 contacts (-36.7/contact) +
2D Compatibility (PS) -4582 + (NN) 3421 + (LL) 1312
1D Compatibility (HY) 800 + (ID) 350
Total energy: -8974.0 ( -34.38 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: