Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIEGEN---P-Q----------SPSVACCDVVRGSDASCLCSIVTTYANLT---DAMG-I----NLRAALLLPKQCKRAVPSGFTCGEID
1SM7 Chain:A ((14-105))
---------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIG--TCP---
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51275 for 464 contacts (-110.5/contact) +
2D Compatibility (PS) -7212 + (NN) -999 + (LL) -52
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -62488.0 ( -134.67 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: