Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSDCTNVLI--SMSPCLNYITGNSS----------TP-----------SSQCCTQLASVVRSSPQCLCQVLNGGGSS------L-G--IEVNKTQAIALPGACNVQTPPISSCN
1PSY Chain:A ((17-116))
--QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32669 for 470 contacts (-69.5/contact) +
2D Compatibility (PS) -7266 + (NN) -2729 + (LL) 372
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -46892.0 ( -99.77 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: