Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSAAQCKEERRLGLNACKPVIYGKLPSPACCERVRVSHVECVCPVITPKLAALI------------DLDRAIRLIEGCGRRVPRHFKCGSITTP
1PSY Chain:A ((64-116))
----------------------------QQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15559 for 215 contacts (-72.4/contact) +
2D Compatibility (PS) -4429 + (NN) -2374 + (LL) 2356
1D Compatibility (HY) -800 + (ID) 600
Total energy: -21406.0 ( -99.56 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: