Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLIGLASKCQKYVVKQ----GSSAK---PSPECCKVVKNVNVPCVCSHVTKQIEDLI-----------------------SMKKVFDVAKSCGKKVTPGTKCGSYTVPN
1B1U Chain:A ((18-110))
-----------DSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9500 for 391 contacts (-24.3/contact) +
2D Compatibility (PS) -6233 + (NN) 31 + (LL) 564
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -19288.0 ( -49.33 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: