Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVPISGLMACKPAVT----PP-NPSA-------PTSACCSALTHADMRCLCSYKNSNLLP------SL-G----IDPNLALQLPPKCNLPRPNC
2LVF Chain:A ((16-105))
--------QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLSPMRC
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18196 for 381 contacts (-47.8/contact) +
2D Compatibility (PS) -7136 + (NN) -4420 + (LL) 528
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -32474.0 ( -85.23 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: