Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADDDAVLLCNMTRGGLEACKPSVRSGSSDPA--ADPSKECCAALAGADLPCLCSYRHSFLLP-----SLG---------IDPDLALQLPAKCNLTATPGC
1HSS Chain:A ((11-106))
---------AFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH---GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32509 for 475 contacts (-68.4/contact) +
2D Compatibility (PS) -7486 + (NN) -2290 + (LL) 692
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -46043.0 ( -96.93 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: