Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVCDMSNEQFMSCQPAAAKTT---DPPAAPSQACCDALAGADLKCLCGYKNSPW------MGVYNID---------PKRAMELPAKCGLATPPDC
1HSS Chain:A ((14-106))
------VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16227 for 416 contacts (-39.0/contact) +
2D Compatibility (PS) -6999 + (NN) -2504 + (LL) 584
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -27596.0 ( -66.34 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: