Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASLTGLNVCAPFLVPGSPTASTECCNAVQSI--NHDCMCNTMR---------------------IAAQIPAQCNLP-PLSCSAN
3OB4 Chain:A ((429-490))
----------------------------ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDL-
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23187 for 203 contacts (-114.2/contact) +
2D Compatibility (PS) -3831 + (NN) -90 + (LL) 928
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -30830.0 ( -151.87 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: