Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQLN--NLNVCAPFVVP----GAA----NTNP-----------NAECCNALEAVQHDCLCSTLQ----------------------ISSRLPSQCNLPPLTCGN
1PSY Chain:A ((16-116))
QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23117 for 366 contacts (-63.2/contact) +
2D Compatibility (PS) -5898 + (NN) -1063 + (LL) -248
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -35826.0 ( -97.89 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: