Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QINTPCSPSMLSTFTPCINFLRNSTA-N--GT---------SPTADCCKSLQTLTSGGRDCLCLIVTGSV---P----FQ-I---PINRTLAISLPRACNMPGVPVQCKV
1SM7 Chain:A ((14-105))
------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRI-YQIAKNLPNVCNMKQ-IGTCP-
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57567 for 449 contacts (-128.2/contact) +
2D Compatibility (PS) -6724 + (NN) 982 + (LL) 528
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -67631.0 ( -150.63 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: