Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YGPCGKHNIEKEAEKLAPCTKAAQDLKAPVSKSCCTVMEKKLK--------NPGCLCAIMLSHTAKNA-GVKPEVAVTIPKRCNIPVRPVGHKCGAFPLV
2ALG Chain:A ((3-79))
-------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQ-LSASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23602 for 434 contacts (-54.4/contact) +
2D Compatibility (PS) -7026 + (NN) -4236 + (LL) 604
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -38210.0 ( -88.04 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: