Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAK----V-M----PSRQCCSNIAGMGKGLPGAKCLCSLLSHP---LAR------S---QG--------VAPRIALGI--PQKCRIAVPRGFVCQGIRVPGS
1BEA Chain:A ((16-111))
------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI-----PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISG-----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37348 for 409 contacts (-91.3/contact) +
2D Compatibility (PS) -6357 + (NN) 723 + (LL) 572
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -46410.0 ( -113.47 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: