Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACGSSYDLAACLPAAES----DIQ------PSAQCCTQLSSYLATDTPEECLCQTAYSPFFQ----SGA-------D----------IQFAIKI--PQKCNLSYRAGIQCNGNTIPGGQ
1BEA Chain:A ((16-111))
------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI-----PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISG------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29941 for 379 contacts (-79.0/contact) +
2D Compatibility (PS) -6496 + (NN) -990 + (LL) 352
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -39825.0 ( -105.08 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: