Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVRNP-TDA---PSAECCAALAGADLACLCRYKSVGGM----WVRFYK---------IDVKRAMALPGKCGLTMPANC
1HSS Chain:A ((14-106))
-----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22976 for 425 contacts (-54.1/contact) +
2D Compatibility (PS) -7183 + (NN) -3117 + (LL) 804
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -34622.0 ( -81.46 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: