Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSSPDRMALRMAPCISAADDPN------SAPTSSCCSAVHTIGKSPSCLCAVMLSNTAN---MA--------GIKPEVAITIPKRCNMADRPIGYKCGDYTLP
1HSS Chain:A ((16-105))
--------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34107 for 408 contacts (-83.6/contact) +
2D Compatibility (PS) -6239 + (NN) 1201 + (LL) 484
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -42461.0 ( -104.07 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: