Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDRTALKLAPCAAATQNP------RA---AVPPSCCAQVRGIGRNPKCLCAVMLS---NTARQA------------G----V-K-PAVAMTIPKRCAIANRPIGYKCGPYTLP
1B1U Chain:A ((16-114))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFC------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41983 for 438 contacts (-95.9/contact) +
2D Compatibility (PS) -6928 + (NN) -382 + (LL) 496
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -52797.0 ( -120.54 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: