Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNCKSTNPSPACCSFMRKITLECVCPRITSDVTKYI------------SLSSILTIAKICHRTLPHQYQCGSYLLP
1PSY Chain:A ((63-116))
--------------------LQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24102 for 225 contacts (-107.1/contact) +
2D Compatibility (PS) -4057 + (NN) 963 + (LL) 620
1D Compatibility (HY) -400 + (ID) 450
Total energy: -27426.0 ( -121.89 by residue)
QMean score : 0.128
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: