Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTFESTLPDLADCRPYVSTGST--Q--T---------DPTAACCSELRNVGHSCLCDLLRDT--------KVPSDI----DINRAVALPGKCSLPGADSCS
1SM7 Chain:A ((14-105))
----------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHG-PFQSTRIYQIAKNLPNVCNMKQIGTCP
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38115 for 410 contacts (-93.0/contact) +
2D Compatibility (PS) -6991 + (NN) -3041 + (LL) 572
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -53475.0 ( -130.43 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: