Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKL---GVLLPCLPFLQ----GQGS--N-------PTQPCCNGLETVVKSNPACLCALVNS---Q-------L-G---NRINITLALSLPSLCNLAGVTIDLCNPTGKFSFKI
2LVF Chain:A ((7-109))
-----ECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMM-RLAENIPSRCNLS-P--MRCPMGG------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40413 for 418 contacts (-96.7/contact) +
2D Compatibility (PS) -7452 + (NN) 1087 + (LL) 1480
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -50698.0 ( -121.29 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: