Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYS--ALLPCAAATRSATA---------------------TPSAACCKVVEGFKSNPACLCSTIAAARA----------AGYSINEHNAESIPTRCKLHGYTPCSKKN
1PSY Chain:A ((18-116))
--CRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28258 for 461 contacts (-61.3/contact) +
2D Compatibility (PS) -6902 + (NN) -949 + (LL) 184
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -40175.0 ( -87.15 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: