Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCSAAQQAMFPCLSAAVGGNPPPPSVACCAAMKSV--SKLEMCQCLVNQTSTVPGLNMTAARNIPANCNISAAADCS
1X2I Chain:A ((2-69))
ALTLAERQRLIVEGL--------PHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIE---
General information:
TITO was launched using:
RESULT:
Template:
1X2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29049 for 410 contacts (-70.9/contact) +
2D Compatibility (PS) -7007 + (NN) -3371 + (LL) -160
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -42137.0 ( -102.77 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1X2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X2I-query.scw
PDB file :
Tito_Scwrl_1X2I.pdb
: