Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQ----GQGS--N-------PTQPCCNGLETVVKSNPACLCALVNS---Q-------L-G---NRINITLALSLPSLCNLAGVTIDLCN
2LVF Chain:A ((17-106))
-------MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMM-RLAENIPSRCNLS-P--MRCP
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40843 for 341 contacts (-119.8/contact) +
2D Compatibility (PS) -6318 + (NN) 2123 + (LL) 156
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -49382.0 ( -144.82 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: