Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQVCKGDFGSLVEQCLQYVQKP----GPKTP---PSEGCCNAINTVDIPCVCQHLPPVVGDIV-------------------S----LEKVAFVLRACGKPLEPGTKCGNYTVPPAV
1B1U Chain:A ((18-110))
------------DSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33259 for 386 contacts (-86.2/contact) +
2D Compatibility (PS) -6189 + (NN) 388 + (LL) 720
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -42940.0 ( -111.24 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: