Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVL--IGMAPCLNYITGSSS------SP----S-------SSCCSQLASVVQSQPRCLCVALNGG-GAA---L-GITI---NRTLALALPGACNVQTPPVSQCDAA
1W2Q Chain:A ((16-118))
---CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRCD--
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57632 for 468 contacts (-123.1/contact) +
2D Compatibility (PS) -7494 + (NN) -1265 + (LL) 240
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -72301.0 ( -154.49 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: