Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIQSAA--ASLSSCLSAAGNAKAK-----------------VPPTCCTKVTALINTAPKCLCAVVLSPLA---KKA-G--I---KPAIAITIPKRCNIKNRPVGKKCGSYIIP
1W2Q Chain:A ((15-112))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52168 for 448 contacts (-116.4/contact) +
2D Compatibility (PS) -6818 + (NN) 1327 + (LL) 240
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -62269.0 ( -138.99 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: