Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSCPAVQQTLTTCLLYATNPHGPPPEPCCNGIKTLHGQSQTPLDRRDVCGCLKSMMTNL-KLNLPAVATLPKECGVDLGYVISPDMDCSKT
1SIY Chain:A ((1-90))
-MTCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57830 for 686 contacts (-84.3/contact) +
2D Compatibility (PS) -9332 + (NN) -5300 + (LL) 188
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -79824.0 ( -116.36 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: