Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEEGKDLVDKINNINLIQQNEESEELNIGKVLA
2K6I Chain:A ((1-47))
--------MGVSVMEAIKEVKLAEEQAVKEIEEAKNRAEQIKAEAIEEAKKLIAC--------
General information:
TITO was launched using:
RESULT:
Template:
2K6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6120 for 180 contacts (34.0/contact) +
2D Compatibility (PS) -4627 + (NN) -126 + (LL) 1200
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 1067.0 ( 5.93 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2K6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6I-query.scw
PDB file :
Tito_Scwrl_2K6I.pdb
: