Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRSNILEITAGLFVLVFTIFLAFFAINKLSDIKKSYKGCYKIYGFFSNANGIEVGDSVKISGVNIGSITGISLDKATYVARLDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSGIKLISNGGKIEYTQSEANVGGIIDKILNMFSK
2LX0 Chain:A ((1-32))
-KKHTIWEVIAGLVALLTFLAFGFWLFKYLQKK----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13343 for 151 contacts (-88.4/contact) +
2D Compatibility (PS) -3006 + (NN) 2395 + (LL) 5724
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -12230.0 ( -80.99 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2LX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LX0-query.scw
PDB file :
Tito_Scwrl_2LX0.pdb
: