Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MFLKVFKSIFLFLVSILFVCPILSLV-SILFTESTNSEWVISTLFPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEFSGPTQSLLREIFHWGKGDYWFPEIKSLGGGILVMGFSLYTYVYILVRSNLKNV-SNSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAIDTFTTGIYRTWFLLHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWSIEKGFFIYGARFYNIIANSIGLSFITAMISVSIAIMIGCTARKNKVINNIARLISLGYAIPNAVIAISIIIFLSKISSFITQYFTEISLVGTVGALIYSYLFRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
| 2ONK Chain:C ((24-275)) | MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSP-----------LKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAA-MPVAAILILLSLAVFVALRIIVG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196539 for 1844 contacts (-106.6/contact) +
2D Compatibility (PS) -24634 + (NN) 1443 + (LL) 23972
1D Compatibility (HY) -17600 + (ID) 2550
Total energy: -215908.0 ( -117.09 by residue)
QMean score : 0.253
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